Dr. Jacques Corbeil focuses on using the latest techniques in bioinformatics and machine learning to assist and facilitate the processes of diagnosis and prognosis determination and to optimize response to treatment. Modern genomic techniques generate a deluge of data that needs to be interpreted using novel bioinformatic approaches. Dr. Corbeil uses state-of-the-art instrumentation and big data analytics to facilitate the interpretation of complex phenotypic data. His research includes investigating how infectious microorganisms interact with their hosts, examining the effects of antibiotics on our microbial flora, exploring how to design small molecules and drugs to interfere with specific microbial functions and integrating omic data in cancer research. Dr. Corbeil operates at the interface of computer and omic sciences.

Dr. Corbeil completed his undergraduate work at Laval University. He obtained his Ph.D. from the University of New South Wales, Sydney, Australia, and received postdoctoral training at the University of California San Diego; continuing on as a faculty member and rising to the rank of Associate Professor until his return to Canada as holder of the Tier 1 Canada Research Chair in Medical Genomics.

CHUL
2705, boulevard Laurier
RC-709
Québec, Québec
Canada G1V 4G2
118 entries « 1 of 12 »

Plante PL, Francovic-Fontaine E, May JC, McLean JA, Baker ES, Laviolette F, Marchand M, Corbeil J

Predicting Ion Mobility Collision Cross-Sections Using a Deep Neural Network: DeepCCS.

Journal Article

Anal Chem, 91 (8), pp. 5191-5199, 2019, ISSN: 0003-2700.

Abstract | Links:

Raymond F, Boissinot M, Ouameur AA, Deraspe M, Plante PL, Kpanou SR, Berube E, Huletsky A, Roy PH, Ouellette M, Bergeron MG, Corbeil J

Culture-enriched human gut microbiomes reveal core and accessory resistance genes.

Journal Article

Microbiome, 7 (1), pp. 56, 2019, ISSN: 2049-2618.

Abstract | Links:

Nsio J, Kapetshi J, Makiala S, Raymond F, Tshapenda G, Boucher N, Corbeil J, Okitandjate A, Mbuyi G, Kiyele M, Mondonge V, Kikoo MJ, Van Herp M, Barboza P, Petrucci R, Benedetti G, Formenty P, Muyembe Muzinga B, Ilunga Kalenga O, Ahuka S, Fausther-Bovendo H, Ilunga BK, Kobinger GP, Muyembe JT

2017 Outbreak of Ebola Virus Disease in Northern Democratic Republic of Congo.

Journal Article

J Infect Dis, 2019, ISSN: 0022-1899.

Abstract | Links:

Drouin A, Letarte G, Raymond F, Marchand M, Corbeil J, Laviolette F

Interpretable genotype-to-phenotype classifiers with performance guarantees.

Journal Article

Sci Rep, 9 (1), pp. 4071, 2019, ISSN: 2045-2322.

Abstract | Links:

Kong LY, Eyre DW, Corbeil J, Raymond F, Walker AS, Wilcox MH, Crook DW, Michaud S, Toye B, Frost E, Dendukuri N, Schiller I, Bourgault AM, Dascal A, Oughton M, Longtin Y, Poirier L, Brassard P, Turgeon N, Gilca R, Loo VG

Clostridium difficile: Investigating Transmission Patterns Between Infected and Colonized Patients Using Whole Genome Sequencing.

Journal Article

Clin Infect Dis, 68 (2), pp. 204-209, 2019, ISSN: 1058-4838.

Abstract | Links:

Ngazoa-Kakou S, Shao Y, Rousseau GM, Addablah AA, Tremblay DM, Hutinet G, Lemire N, Plante PL, Corbeil J, Koudou A, Soro BK, Coulibaly DN, Aoussi S, Dosso M, Moineau S

Complete Genome Sequence of Escherichia coli Siphophage BRET.

Journal Article

Microbiol Resour Announc, 8 (5), 2019, ISSN: 2576-098X.

Abstract | Links:

Labbe M, Raymond F, Levesque A, Thaler M, Mohit V, Audet M, Corbeil J, Culley A

Communities of Phytoplankton Viruses across the Transition Zone of the St. Lawrence Estuary.

Journal Article

Viruses, 10 (12), 2018, ISSN: 1999-4915.

Abstract | Links:

Brisebois E, Veillette M, Dion-Dupont V, Lavoie J, Corbeil J, Culley A, Duchaine C

Human viral pathogens are pervasive in wastewater treatment center aerosols.

Journal Article

J Environ Sci (China), 67 , pp. 45-53, 2018, ISSN: 1001-0742.

Abstract | Links:

Sylvain M, Lehoux F, Morency S, Faucher F, Bharucha E, Tremblay DM, Raymond F, Sarrazin D, Allard M, Moineau S, Corbeil J, Messaddeq Y, Gosselin B

The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring.

Journal Article

IEEE Trans Biomed Circuits Syst, 12 (6), pp. 1289-1300, 2018, ISSN: 1932-4545.

Abstract | Links:

Maheux AF, Boudreau DK, Berube E, Boissinot M, Raymond F, Brodeur S, Corbeil J, Isabel S, Omar RF, Bergeron MG

Draft Genome Sequence of a Sporulating and Motile Strain of Lachnotalea glycerini Isolated from Water in Québec City, Canada.

Journal Article

Genome Announc, 5 (42), 2017.

Abstract | Links:

118 entries « 1 of 12 »
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Active projects

  • 3.2 Comprehensive environmental monitoring and valorisation: From molecules to microorganisms, Subvention, Secrétariat des programmes interorganismes à l’intention des établissements, Fonds d'excellence en recherche Apogée Canada, from 2016-04-01 to 2020-03-31
  • Advanced study of unconventional oil behaviour, innovative emergency measures to surface water oil spills: protection of water sources, Partenariat, Conseil de recherches en sciences naturelles et génie Canada, Subventions de projets stratégiques (SPS), from 2016-09-30 to 2019-09-29
  • Calcul Québec, Subvention, Fonds de recherche du Québec - Nature et technologies, Regroupements stratégiques NT, from 2015-04-01 to 2021-03-31
  • Canada Research Chair in Medical genomics, Partenariat, Secrétariat des programmes interorganismes à l’intention des établissements, Fonds des leaders John-R.-Evans - CRC (anciennement : Chaires de recherche du Canada - infrastructure et Fonds des leaders - Volet 2), from 2018-08-01 to 2019-12-31
  • Centre de recherche en arthrite de l'Université Laval, Subvention, Institutionnel - BDR, BDR - Entités de recherche en émergence, from 2019-01-01 to 2020-01-31
  • Centre de recherche en données massives, Subvention, Institutionnel - BDR, BDR - Centres de recherche reconnus, from 2016-06-07 to 2021-06-06
  • Centre hospitalier universitaire de Québec - Université Laval, Subvention, Centre hospitalier universitaire de Québec - Université Laval, Centres de recherche affiliés, from 2017-01-01 to 2099-12-31
  • Chaire de recherche du Canada en Medical genomics, Subvention, Secrétariat des programmes interorganismes à l’intention des établissements, Chaires de recherche du Canada - Fonctionnement, from 2018-01-01 to 2024-12-31
  • Deciphering breast cancer HER2-negativity with regard to HER2-targeted therapy, Subvention, Instituts de recherche en santé du Canada, Volet Projet: Concours pilotes, from 2016-07-01 to 2020-06-30
  • Observatoire international sur les impacts sociétaux de l'intelligence artificielle et du numérique, Subvention, Fonds de recherche du Québec - Société et culture, Appel à propositions : création d’un Observatoire international sur les impacts sociétaux de l’intelligence artificielle et du numérique, from 2018-04-01 to 2024-03-31

Recently finished projects

  • Canadian Microbiome Resource (CanMoR) - Avis d'intention, Subvention, Instituts de recherche en santé du Canada, Autre : Initiative canadienne microbiome 2 : Plateforme de recherche, from 2018-05-01 to 2019-03-31
  • Caractérisation des signatures cellulaires des infections virales pour identifier des antiviraux contre les paramyxivirus., Subvention, Fondation de l'Université Laval, from 2015-10-01 to 2017-09-30
  • Centre de recherche en infectiologie, Subvention, Institutionnel - BDR, BDR - Centres de recherche reconnus, from 1996-06-01 to 2019-04-30
  • Centre de recherche sur les données massives (CRDM), Subvention, Institutionnel - BDR, BDR - Cas spéciaux et obligations institutionnelles, from 2015-05-01 to 2017-04-30
  • Chaire de recherche du Canada en génomique médicale, Subvention, Secrétariat des Chaires de recherche du Canada, Chaires de recherche du Canada - Fonctionnement, from 2011-01-01 to 2017-12-31
  • Computational and machine learning approaches to improve design and screening of high bioactivity peptides for drug discovery, Subvention, Consortium québécois sur la découverte du médicament, Concours FOCUS, from 2014-12-01 to 2017-11-30
  • Croissance de Legionella pneumophila dans les systèmes hydriques: comprendre la relation entre son génome et le microbiome., Subvention, Fonds de recherche du Québec - Nature et technologies, Projet de recherche en équipe, from 2015-04-01 to 2018-03-31
  • Evaluation of blood products in health and disease using machine learning and high throughput mass spectrometry, Subvention, MITACS Inc., Converge Project Proposal, from 2016-03-01 to 2019-03-31
  • Infrastructure to Curb Atherosclerosis Through Precision Medicine, Partenariat, Fondation Canadienne pour l'innovation (La), Fonds d'innovation (FI), from 2018-08-15 to 2019-03-31
Data provided by the Université Laval research projects registery